Publications in chronological order.


  1. Spatio-temporal dynamics of intra-host variability in SARS-CoV-2 genomes
    Ankit K Pathak, Gyan Prakash Mishra, Bharathram Uppili, and 8 more authors
    Nucleic acids research, 2022
  2. Long-read 16S-seq reveals nasopharynx microbial dysbiosis and enrichment of Mycobacterium and Mycoplasma in COVID-19 patients: a potential source of co-infection
    Punit Prasad, Soumendu Mahapatra, Rasmita Mishra, and 8 more authors
    Molecular Omics, 2022
  3. Genotypic and phenotypic diversity of the multidrug-resistant Mycobacterium tuberculosis strains from eastern India
    Arup Ghosh, Himadri Bal, Viplov Kumar Biswas, and 3 more authors
    bioRxiv, 2022
  4. Genomic profiles of vaccine breakthrough SARS-CoV-2 strains from Odisha, India
    Arup Ghosh, Safal Walia, Roma Rattan, and 8 more authors
    International Journal of Infectious Diseases, 2022
  5. Isolation and characterization of 5 SARS CoV-2 strains of different clades and lineages circulating in Eastern India
    Bharati Singh, Kiran Avula, Sanchari Chatterjee, and 8 more authors
    Frontiers in Microbiology, 2022
  6. CMTM6 attenuates cisplatin-induced cell death in OSCC by regulating AKT/c-Myc-driven ribosome biogenesis
    Pallavi Mohapatra, Sibasish Mohanty, Shamima Azma Ansari, and 7 more authors
    The FASEB Journal, 2022


  1. Sequence analysis of Indian SARS-CoV-2 isolates shows a stronger interaction of mutant receptor-binding domain with ACE2
    Pujarini Dash, Jyotirmayee Turuk, Santosh K Behera, and 8 more authors
    International Journal of Infectious Diseases, 2021
  2. Differential mitochondrial genome in patients with Rheumatoid Arthritis
    Kumar Sagar Jaiswal, Shweta Khanna, Arup Ghosh, and 3 more authors
    Autoimmunity, 2021
  3. CMTM6 drives cisplatin resistance by regulating Wnt signaling through the ENO-1/AKT/GSK3βaxis
    Pallavi Mohapatra, Omprakash Shriwas, Sibasish Mohanty, and 8 more authors
    JCI insight, 2021
  4. Zbtb10 transcription factor is crucial for murine cDC1 activation and cytokine secretion
    Shuchi Smita, Arup Ghosh, Viplov Kumar Biswas, and 6 more authors
    European Journal of Immunology, 2021
  5. Quantitative proteomics of hamster lung tissues infected with SARS-CoV-2 reveal host factors having implication in the disease pathogenesis and severity
    Voddu Suresh, Varshasnata Mohanty, Kiran Avula, and 8 more authors
    The FASEB Journal, 2021
  6. Single-Cell Immunogenomic Approach Identified SARS-CoV-2 Protective Immune Signatures in Asymptomatic Direct Contacts of COVID-19 Cases
    Kaushik Sen, Sudeshna Datta, Arup Ghosh, and 8 more authors
    Frontiers in Immunology, 2021
  7. Clinical, Virological, Immunological, and Genomic Characterization of Asymptomatic and Symptomatic Cases With SARS-CoV-2 Infection in India
    Sanchari Chatterjee, Ankita Datey, Soumya Sengupta, and 8 more authors
    Frontiers in cellular and infection microbiology, 2021


  1. BedSect: an integrated web server application to perform intersection, visualization, and functional annotation of genomic regions from multiple datasets
    Gyan Prakash Mishra, Arup Ghosh, Atimukta Jha, and 1 more author
    Frontiers in Genetics, 2020
  2. PAN-INDIA 1000 SARS-CoV-2 RNA genome sequencing reveals important insights into the outbreak
    Arindam Maitra, Sunil Raghav, Ashwin Dalal, and 8 more authors
    BioRxiv, 2020
  3. Analysis of Indian SARS-CoV-2 genomes reveals prevalence of D614G mutation in spike protein predicting an increase in interaction with TMPRSS2 and virus infectivity
    Sunil Raghav, Arup Ghosh, Jyotirmayee Turuk, and 8 more authors
    Frontiers in Microbiology, 2020
  4. ANN: A platform to annotate text with Wikidata IDs
    Tiago Lubiana, Sabine Weber, Bruno Andrade Paranhos, and 6 more authors
  5. Altered mitochondrial proteome and functional dynamics in patients with rheumatoid arthritis
    Shweta Khanna, Prasanta Padhan, Kumar S Jaiswal, and 6 more authors
    Mitochondrion, 2020


  1. Epigenetics and Epigenomics Analysis for Autoimmune Diseases
    Bhawna Gupta, Kumar Sagar Jaiswal, Arup Ghosh, and 1 more author
    In Computational Epigenetics and Diseases, 2019


  1. EumicrobeDBLite: a lightweight genomic resource and analytic platform for draft oomycete genomes
    Arijit Panda, Diya Sen, Arup Ghosh, and 6 more authors
    Molecular plant pathology, 2018
  2. Importance of EMT factor ZEB1 in cDC1 “MutuDC line” mediated induction of Th1 immune response
    Shuchi Smita, Abdul Ahad, Arup Ghosh, and 5 more authors
    Frontiers in immunology, 2018